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  5. LOC_Os12g34014.1

LOC_Os12g34014.1 (LOC_Os12g34014)


Aliases : LOC_Os12g34014

Description : component ND6/NQO10 of NADH dehydrogenase proton translocation (module P)


Gene families : OG0007690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g34014.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
ATMG00270 NAD6 NADH dehydrogenase 6 0.07 OrthoFinder output from all 47 species
Ceric.1Z190400.1 NAD6, Ceric.1Z190400 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z191900.1 NAD6, Ceric.1Z191900 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z200900.1 NAD6, Ceric.1Z200900 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z245300.1 NAD6, Ceric.1Z245300 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z252900.1 NAD6, Ceric.1Z252900 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z284500.1 NAD6, Ceric.1Z284500 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z286800.1 NAD6, Ceric.1Z286800 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Ceric.1Z302200.1 NAD6, Ceric.1Z302200 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z307300.1 NAD6, Ceric.1Z307300 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Gb_09573 NAD6 component ND6/NQO10 of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Len_g50007 NAD6 component *(ND6/NQO10) of NADH dehydrogenase proton... 0.01 OrthoFinder output from all 47 species
Pp3c12_12240V3.1 NAD6, Pp3c12_12240 NADH dehydrogenase 6 0.01 OrthoFinder output from all 47 species
Solyc00g021630.1.1 NAD6, Solyc00g021630 component ND6/NQO10 of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001457 NADH_UbQ/plastoQ_OxRdtase_su6 14 169
No external refs found!