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  5. LOC_Os12g34840.1

LOC_Os12g34840.1 (LOC_Os12g34840)


Aliases : LOC_Os12g34840

Description : ROP-activating protein (RopGAP)


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g34840.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.09 OrthoFinder output from all 47 species
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.03 OrthoFinder output from all 47 species
AT2G46710 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.02 OrthoFinder output from all 47 species
AT3G11490 No alias rac GTPase activating protein 0.01 OrthoFinder output from all 47 species
AT4G03100 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.15 OrthoFinder output from all 47 species
Als_g02543 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08802 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25512 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05570 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06070 No alias ROP-activating protein *(RopGAP) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01036109001 No alias Multi-process regulation.Rop GTPase regulatory... 0.06 OrthoFinder output from all 47 species
Gb_17730 No alias ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.01 OrthoFinder output from all 47 species
Lfl_g39497 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436113g0010 No alias ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Nbi_g08581 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.16 OrthoFinder output from all 47 species
Solyc09g074340.3.1 Solyc09g074340 ROP-activating protein (RopGAP) 0.07 OrthoFinder output from all 47 species
Spa_g12214 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04660 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44395 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018302_P003 Zm00001e018302 ROP-activating protein (RopGAP) 0.22 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 151 286
IPR000095 CRIB_dom 88 116
No external refs found!