Aliases : LOC_Os12g35710
Description : LRR-domain extensin
Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os12g35710.1 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G49490 | No alias | Leucine-rich repeat (LRR) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G15880 | No alias | Leucine-rich repeat (LRR) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G19020 | No alias | Leucine-rich repeat (LRR) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G33970 | No alias | Leucine-rich repeat (LRR) family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g004980 | LRX2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37061 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05958 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03151 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14310 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G055900.1 | Ceric.17G055900 | LRR-domain extensin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10806 | LRX2 | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g15319 | No alias | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g36028 | No alias | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015276001 | No alias | Leucine-rich repeat extensin-like protein 4... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031843001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g08774 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24034 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g38364 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14745 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g39205 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19666 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10314 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13602 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g012995 | LRX2 | not classified & original description: CDS=401-2401 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g108900.4.1 | Solyc01g108900 | LRR-domain extensin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g088950.3.1 | Solyc12g088950 | Pollen-specific leucine-rich repeat extensin-like... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g05733 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02020 | No alias | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e017627_P001 | LRX2, Zm00001e017627 | Pollen-specific leucine-rich repeat extensin-like... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
