LOC_Os12g36890.1 (ATCSLD5, CSLD5, SOS6,...)

Aliases : ATCSLD5, CSLD5, SOS6, LOC_Os12g36890

Description : mannan synthase (CSLD)

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g36890.1
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00116280	ATCSLD5, CSLD5,...	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.11	OrthoFinder output from all 47 species
AMTR_s00057p00116410	ATCSLD5, CSLD5,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.12	OrthoFinder output from all 47 species
AT1G02730	ATCSLD5, CSLD5, SOS6	cellulose synthase-like D5	0.21	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
Adi_g034293	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g044360	ATCSLD4, CSLD4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g059427	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g082699	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g104894	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g112515	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Adi_g117325	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aev_g49400	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ala_g14910	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g04374	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Als_g52588	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aob_g27305	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g09607	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.11	OrthoFinder output from all 47 species
Aop_g10975	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene58191.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68876.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.09G024100.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ceric.21G060900.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.06	OrthoFinder output from all 47 species
Dac_g11938	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Dde_g31832	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ehy_g06209	CESA6, PRC1, IXR2, E112	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01021248001	CESA8, LEW2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01023643001	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01028071001	ATCSLD5, CSLD5, SOS6	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.21	OrthoFinder output from all 47 species
GSVIVT01028402001	CESA4, NWS2, IRX5	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
Gb_05828	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Gb_30276	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Len_g07988	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19077	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Len_g59359	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.05	OrthoFinder output from all 47 species
MA_60546g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.06	OrthoFinder output from all 47 species
Mp2g02440.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Mp2g05640.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Mp2g05660.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.03	OrthoFinder output from all 47 species
Mp2g05670.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.02	OrthoFinder output from all 47 species
Mp2g07690.1	ATH-A, CESA2, ATCESA2	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Mp5g24530.1	ATCSLD2, CSLD2	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Msp_g06842	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Msp_g31034	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.07	OrthoFinder output from all 47 species
Msp_g48239	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g10118	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.12	OrthoFinder output from all 47 species
Ore_g37613	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44822	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g02585	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ppi_g16136	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22229	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Ppi_g30689	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Smo141535	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Smo73698	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
Smo83878	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.06	OrthoFinder output from all 47 species
Solyc09g075550.3.1	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.09	OrthoFinder output from all 47 species
Spa_g38942	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g49131	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g51152	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06669	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g19698	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009592_P002	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e037015_P002	CSLD1, ATCSLD1,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Zm00001e039669_P001	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.16	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	411	1202

External Links

No external refs found!

LOC_Os12g36890.1 (ATCSLD5, CSLD5, SOS6,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation