Aliases : PUB13, ATPUB13, LOC_Os12g38210
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00200790 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 11 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G46510 | PUB13, ATPUB13 | plant U-box 13 | 0.05 | OrthoFinder output from all 47 species | |
| AT3G54850 | PUB14, ATPUB14 | plant U-box 14 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G42340 | PUB15 | Plant U-Box 15 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g009234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023452 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025519 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g057744 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059681 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082530 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04410 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07408 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g08869 | PUB15 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09506 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03476 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01345 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g05472 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g60695 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007619 | PUB13, ATPUB13 | not classified & original description: CDS=1-951 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0292.g063403 | No alias | not classified & original description: CDS=1-2253 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0497.g073607 | PUB12, AtPUB12 | not classified & original description: CDS=1-549 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G103500.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50631830... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.07G010000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G008100.1 | PUB25, Ceric.19G008100 | not classified & original description: pacid=50576706... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z057600.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G061700.1 | Ceric.32G061700 | not classified & original description: pacid=50598646... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G048100.1 | Ceric.34G048100 | E3 ubiquitin ligase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.35G012000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.35G034600.1 | PUB18, ATPUB18,... | not classified & original description: pacid=50581001... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g01449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g40757 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05458 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07071 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04784 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g18762 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04978 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09056 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29208 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023893001 | PUB15 | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08792 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g49950.1 | LOC_Os02g49950 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g08149 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g13185 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_103976g0010 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426688g0010 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.03 | OrthoFinder output from all 47 species | |
| MA_27512g0010 | PUB15 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_84321g0010 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_9478009g0010 | PUB15 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09964 | PUB18, ATPUB18 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g14639 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03090 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07686 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39748 | PUB13, ATPUB13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11295 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07479 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06418 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14332 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016119 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=1314-3077 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0109.g020568 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=347-2224 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19747 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25175 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39035 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo181353 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Smo415326 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g007640.3.1 | Solyc04g007640 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g094610.3.1 | PUB15, Solyc12g094610 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07352 | ATPUB17, PUB17 | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14575 | PUB18, ATPUB18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21993 | PUB13, ATPUB13 | E3 ubiquiTin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001226_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e002954_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e018161_P001 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036734_P001 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| No external refs found! |
