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  5. LOC_Os12g38450.1

LOC_Os12g38450.1 (LOC_Os12g38450)


Aliases : LOC_Os12g38450

Description : Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica (sp|q8h038|katam_orysj : 416.0)


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g38450.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00122370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00039770 evm_27.TU.AmTr_v1... Probable xyloglucan galactosyltransferase GT19... 0.09 OrthoFinder output from all 47 species
Adi_g015997 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079878 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00706 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39217 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67021.t1 Aspi01Gene67021 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008340 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: CDS=1-1620 0.02 OrthoFinder output from all 47 species
Cba_g19522 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G020100.1 MUR3, KAM1,... 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G023900.1 Ceric.38G023900 not classified & original description: pacid=50580372... 0.03 OrthoFinder output from all 47 species
Dac_g41055 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01994 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 OrthoFinder output from all 47 species
Gb_09780 MUR3, KAM1 Xyloglucan galactosyltransferase MUR3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g09002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7543346g0010 MUR3, KAM1 Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Mp6g05660.1 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05376 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19914 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36894 MUR3, KAM1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16802 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018143 No alias not classified & original description: CDS=1-1647 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022530 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g115750.1.1 Solyc03g115750 Probable xyloglucan galactosyltransferase GT11... 0.05 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.05 OrthoFinder output from all 47 species
Spa_g08625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11922 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000041_P001 Zm00001e000041 Probable xyloglucan galactosyltransferase GT19... 0.04 OrthoFinder output from all 47 species
Zm00001e037897_P001 Zm00001e037897 Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 96 446
No external refs found!