LOC_Os12g42250.1 (LOC_Os12g42250)


Aliases : LOC_Os12g42250

Description : C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g42250.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00048470 ZFP6,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 OrthoFinder output from all 47 species
AT2G41940 ZFP8 zinc finger protein 8 0.06 OrthoFinder output from all 47 species
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.05 OrthoFinder output from all 47 species
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G01860 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G05120 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g035526 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g060299 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g16100 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g16389 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ala_g22523 KNU C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g21302 ZFP7 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g26427 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g27336 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g21661 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g23609 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03058.t1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32976.t1 Aspi01Gene32976 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34694.t1 Aspi01Gene34694 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39589.t1 KNU, Aspi01Gene39589 C2H2 subclass ZFP transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene51181.t1 KNU, Aspi01Gene51181 C2H2 subclass ZFP transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene51187.t1 ZFP6, Aspi01Gene51187 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62484.t1 Aspi01Gene62484 transcriptional regulator *(JAG/NUB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62498.t1 ZFP1, ATZFP1,... C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G076800.1 ZFP10, ATZFP10,... not classified & original description: pacid=50577410... 0.03 OrthoFinder output from all 47 species
Ceric.05G076900.1 ZFP10, ATZFP10,... not classified & original description: pacid=50579147... 0.03 OrthoFinder output from all 47 species
Ceric.08G034400.1 ZFP1, ATZFP1,... C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.1Z195100.1 ZFP10, ATZFP10,... not classified & original description: pacid=50637475... 0.03 OrthoFinder output from all 47 species
Ceric.1Z195200.1 ZFP10, ATZFP10,... not classified & original description: pacid=50637476... 0.03 OrthoFinder output from all 47 species
Ceric.1Z234900.1 ZFP10, ATZFP10,... not classified & original description: pacid=50613671... 0.04 OrthoFinder output from all 47 species
Ceric.1Z238700.1 ZFP10, ATZFP10,... not classified & original description: pacid=50637267... 0.04 OrthoFinder output from all 47 species
Ceric.1Z257400.1 ZFP10, ATZFP10,... not classified & original description: pacid=50606317... 0.04 OrthoFinder output from all 47 species
Dac_g02189 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15821 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g24028 KNU C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g38400 GIS2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10623 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10877 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g19018 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g42268 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g39982 ZFP8 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g47562 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13421 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g30781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01011890001 JAG Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01028555001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01037897001 ZFP1, ATZFP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_27734 ZFP10, ATZFP10 Zinc finger protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g04120.1 LOC_Os01g04120 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os04g08600.1 SUP, FLO10,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g26200.1 ZFP3, LOC_Os09g26200 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os09g26210.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os09g27320.1 ZFP8, LOC_Os09g27320 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g37209 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g51208 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g17881 GIS2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g23477 ATZFP2, ZFP2 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g24190 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_110160g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_126188g0010 ZFP6 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5999529g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g25140.1 ZFP11, ATZFP11 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g10324 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g10608 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10922 ZFP11, ATZFP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16757 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g22987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34996 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g21478 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g29174 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g30170 ZFP4 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g20538 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c6_19230V3.1 Pp3c6_19230 C2H2 and C2HC zinc fingers superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g33080 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g59122 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002709 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023323 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g19015 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc01g005130.2.1 ZFP4, Solyc01g005130 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc01g107430.2.1 ZFP7, Solyc01g107430 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc03g117070.1.1 Solyc03g117070 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc04g014540.3.1 ZFP4, Solyc04g014540 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc05g009380.4.1 JAG, Solyc05g009380 Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g077000.1.1 Solyc08g077000 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc09g011120.1.1 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g061870.3.1 Solyc09g061870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g089590.1.1 SUP, FLO10,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc10g084910.3.1 TAC1, Solyc10g084910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011890.2.1 ZFP4, Solyc11g011890 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e008019_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e009853_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e009854_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e010687_P001 ZFP7, Zm00001e010687 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e012453_P001 ZFP1, ATZFP1,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e016020_P001 ZFP8, Zm00001e016020 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e017009_P001 Zm00001e017009 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e020926_P001 Zm00001e020926 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e022212_P001 ZFP8, Zm00001e022212 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e025746_P001 Zm00001e025746 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e030783_P001 ZFP8, Zm00001e030783 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e032639_P001 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e036220_P001 ZFP8, Zm00001e036220 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037944_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e040612_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.09 OrthoFinder output from all 47 species
Zm00001e040940_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!