LOC_Os12g43790.1 (AtbZIP6, bZIP6, LOC_Os12g43790)

Aliases : AtbZIP6, bZIP6, LOC_Os12g43790

Description : transcription factor (bZIP)

Gene families : OG0000391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000391_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g43790.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AT1G13600	bZIP58, AtbZIP58	basic leucine-zipper 58	0.04	OrthoFinder output from all 47 species
AT1G75390	bZIP44, AtbZIP44	basic leucine-zipper 44	0.03	OrthoFinder output from all 47 species
AT3G49760	bZIP5, AtbZIP5	basic leucine-zipper 5	0.02	OrthoFinder output from all 47 species
AT4G37730	AtbZIP7, bZIP7	basic leucine-zipper 7	0.02	OrthoFinder output from all 47 species
AT5G15830	AtbZIP3, bZIP3	basic leucine-zipper 3	0.03	OrthoFinder output from all 47 species
Aop_g58086	AtbZIP63, BZO2H3	bZIP class-C transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g00297	bZIP44, AtbZIP44	bZIP class-S/SE transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010152001	bZIP43, AtbZIP43	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
GSVIVT01021790001	AtbZIP63, BZO2H3	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
GSVIVT01023817001	bZIP44, AtbZIP44	RNA biosynthesis.transcriptional activation.bZIP...	0.03	OrthoFinder output from all 47 species
Gb_20759	bZIP44, AtbZIP44	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
LOC_Os02g09830.1	bZIP43,...	transcription factor (bZIP)	0.05	OrthoFinder output from all 47 species
MA_35014g0010	bZIP44, AtbZIP44	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
MA_91576g0010	bZIP42, ATBZIP42	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
MA_960494g0010	AtbZIP63, BZO2H3	transcription factor (bZIP). transcription factor (bZIP9/10/25)	0.03	OrthoFinder output from all 47 species
Sam_g19146	No alias	bZIP class-C transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g109880.3.1	bZIP44,...	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Spa_g04821	bZIP44, AtbZIP44	bZIP class-S/SE transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e013767_P004	BZIP9, BZO2H2,...	transcription factor (bZIP). transcription factor (bZIP9/10/25)	0.02	OrthoFinder output from all 47 species
Zm00001e015708_P001	bZIP43,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	HCCA
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030026	cellular manganese ion homeostasis	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055071	manganese ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	60	108

External Links

No external refs found!

LOC_Os12g43790.1 (AtbZIP6, bZIP6, LOC_Os12g43790)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation