1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g43880.1

LOC_Os12g43880.1 (LOC_Os12g43880)


Aliases : LOC_Os12g43880

Description : no description available(sp|q65xs5|bc10_orysj : 149.0)


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g43880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00174320 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00079p00180800 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G10880 No alias Core-2/I-branching... 0.08 OrthoFinder output from all 47 species
AT1G68380 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT1G73810 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT4G32290 No alias Core-2/I-branching... 0.06 OrthoFinder output from all 47 species
AT5G16170 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT5G25330 No alias Core-2/I-branching... 0.08 OrthoFinder output from all 47 species
Adi_g097183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19106.t1 Aspi01Gene19106 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47321.t1 Aspi01Gene47321 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70120.t2 Aspi01Gene70120 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70121.t1 Aspi01Gene70121 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70136.t1 Aspi01Gene70136 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70141.t1 Aspi01Gene70141 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G049600.1 Ceric.18G049600 not classified & original description: pacid=50621726... 0.02 OrthoFinder output from all 47 species
Dcu_g45847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031004001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_25831 No alias no description available(sp|q65xs5|bc10_orysj : 177.0) 0.02 OrthoFinder output from all 47 species
LOC_Os02g22160.1 LOC_Os02g22160 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.06 OrthoFinder output from all 47 species
Lfl_g07289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_112910g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_112910g0020 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.03 OrthoFinder output from all 47 species
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.04 OrthoFinder output from all 47 species
MA_28957g0010 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.02 OrthoFinder output from all 47 species
Mp4g07380.1 No alias no description available(sp|q65xs5|bc10_orysj : 118.0) 0.03 OrthoFinder output from all 47 species
Msp_g08650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_8790V3.1 Pp3c6_8790 Core-2/I-branching... 0.02 OrthoFinder output from all 47 species
Ppi_g08730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006751 No alias not classified & original description: CDS=1-447 0.02 OrthoFinder output from all 47 species
Solyc04g009760.2.1 Solyc04g009760 no description available(sp|q65xs5|bc10_orysj : 95.9) 0.04 OrthoFinder output from all 47 species
Solyc05g009120.3.1 Solyc05g009120 no description available(sp|q65xs5|bc10_orysj : 165.0) 0.04 OrthoFinder output from all 47 species
Solyc05g009130.4.1 Solyc05g009130 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species
Tin_g02721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025751_P001 Zm00001e025751 no description available(sp|q65xs5|bc10_orysj : 124.0) 0.03 OrthoFinder output from all 47 species
Zm00001e026725_P003 Zm00001e026725 no description available(sp|q65xs5|bc10_orysj : 579.0) 0.02 OrthoFinder output from all 47 species
Zm00001e029160_P001 Zm00001e029160 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species
Zm00001e040053_P001 Zm00001e040053 no description available(sp|q65xs5|bc10_orysj : 165.0) 0.04 OrthoFinder output from all 47 species
Zm00001e042023_P001 Zm00001e042023 no description available(sp|q65xs5|bc10_orysj : 163.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 138 365
No external refs found!