Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP3 component
Gene families : OG0003859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo105823 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00182570 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| AT4G25890 | No alias | 60S acidic ribosomal protein family | 0.07 | OrthoFinder output from all 47 species | |
| AT5G57290 | No alias | 60S acidic ribosomal protein family | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g053256 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g06306 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35024 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12760 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g41418 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g20552 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G014300.1 | Ceric.24G014300 | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g46270 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g46271 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g19693 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010910001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_31564 | No alias | component RPP3 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os01g13080.1 | LOC_Os01g13080 | component RPP3 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g48780.1 | LOC_Os06g48780 | component RPP3 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Len_g49119 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10431312g0020 | No alias | component RPP3 of LSU proteome component. component... | 0.08 | OrthoFinder output from all 47 species | |
| MA_468112g0010 | No alias | component RPP3 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g07010.1 | No alias | component RPP3 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g18566 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c21_16160V3.1 | Pp3c21_16160 | 60S acidic ribosomal protein family | 0.1 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006166 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24981 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g009330.4.1 | Solyc07g009330 | component RPP3 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g04803 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g17718 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g00251 | No alias | component *(RPP3) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013180_P001 | Zm00001e013180 | component RPP3 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
