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  5. Smo105865

Smo105865


Description : Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo105865
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252340 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00089750 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00106420 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00146080 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00183610 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00041710 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.02 OrthoFinder output from all 47 species
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G52660 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 OrthoFinder output from all 47 species
AT3G15700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
Aev_g06771 RPS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56659.t1 Aspi01Gene56659 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0292.g063388 No alias not classified & original description: CDS=385-3447 0.03 OrthoFinder output from all 47 species
GSVIVT01014599001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_08717 RPS5 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24897 No alias Probable disease resistance protein At4g27220... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10910.1 RPS2, LOC_Os03g10910 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14900.1 LOC_Os03g14900 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g29781 RPS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10244735g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10322161g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10431079g0020 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432804g0010 No alias Putative disease resistance protein At4g10780... 0.02 OrthoFinder output from all 47 species
MA_10436967g0010 RPS5 Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_1061049g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_125257g0010 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
MA_178357g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_391551g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_40435g0010 No alias Probable disease resistance protein At1g61310... 0.02 OrthoFinder output from all 47 species
MA_5551624g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_562728g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.03 OrthoFinder output from all 47 species
Pir_g33523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_2480V3.1 Pp3c19_2480 NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species
Solyc02g037540.3.1 Solyc02g037540 Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
Solyc06g048910.2.1 Solyc06g048910 Disease resistance protein At4g27190 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g076440.1.1 Solyc10g076440 Disease resistance protein At4g27190 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g007790.1.1 Solyc11g007790 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 6 195
No external refs found!