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  5. Smo106498

Smo106498 (LIL3:1)


Aliases : LIL3:1

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein


Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo106498
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT4G17600 LIL3:1 Chlorophyll A-B binding family protein 0.07 OrthoFinder output from all 47 species
Adi_g020993 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10014 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15592 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001642 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.20G033200.1 LIL3:1, Ceric.20G033200 LHCII-stabilizing factor *(SEP3) & original description:... 0.04 OrthoFinder output from all 47 species
Cre03.g199535 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Ehy_g03144 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003693001 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Gb_05189 LIL3:1 SEP3 LHC-related protein 0.05 OrthoFinder output from all 47 species
MA_10427346g0010 LIL3:1 SEP3 LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp1g17030.1 LIL3:1 SEP3 LHC-related protein 0.1 OrthoFinder output from all 47 species
Ore_g15482 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28824 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c2_19700V3.1 LIL3:1, Pp3c2_19700 Chlorophyll A-B binding family protein 0.03 OrthoFinder output from all 47 species
Solyc08g077880.3.1 LIL3:1, Solyc08g077880 SEP3 LHC-related protein 0.04 OrthoFinder output from all 47 species
Spa_g16684 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!