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  5. Smo110151

Smo110151 (AGO1)


Aliases : AGO1

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Smo110151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g088499 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114845 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23145 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62001.t1 AGO3, Aspi01Gene62001 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os04g06770.2 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Msp_g14613 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30168 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15671 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.02 OrthoFinder output from all 47 species
Sam_g39081 No alias regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38063 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51306 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012276_P001 AGO1, Zm00001e012276 Protein argonaute 12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046937 phytochelatin metabolic process IEP HCCA
BP GO:0046938 phytochelatin biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 309 434
No external refs found!