Aliases : REME1
Description : Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo11063 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G04780 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004418 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g36953 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g42174 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04109 | EMB2758 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g11518 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21415 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21679 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g32458 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g33844 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35873 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07409 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g07960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15766 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g33192 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18162 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g23402 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene02394.t1 | Aspi01Gene02394 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene55895.t1 | Aspi01Gene55895 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69580.t1 | Aspi01Gene69580 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0010.g012358 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2001 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g025886 | No alias | not classified & original description: CDS=1-2634 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036583 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0115.g046284 | No alias | not classified & original description: CDS=76-2679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048776 | No alias | not classified & original description: CDS=1-1662 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0195.g057240 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0233.g059353 | No alias | not classified & original description: CDS=91-3312 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g15323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15829 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g31382 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G062400.1 | Ceric.13G062400 | not classified & original description: pacid=50636814... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G051200.1 | Ceric.20G051200 | not classified & original description: pacid=50566546... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.34G063200.1 | Ceric.34G063200 | not classified & original description: pacid=50623126... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g19126 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30041 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07839 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38857 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g04001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05220 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22610 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24358 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12832 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g04400.1 | LOC_Os08g04400 | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g30760.1 | LOC_Os10g30760 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g38488 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44422 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g49921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54970 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g56497 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57720 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07380 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07580 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g33010 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28743 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28799 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43428 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g05484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g08399 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g16042 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g16805 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g20126 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g20334 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27842 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g32050 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g01771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34280 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g40050 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03012 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g62205 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64957 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g04226 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16101 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20675 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30301 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06872 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g28712 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53555 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g54615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57858 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61143 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005914 | No alias | not classified & original description: CDS=1-2298 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018966 | No alias | not classified & original description: CDS=1-2631 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0136.g022393 | No alias | not classified & original description: CDS=167-2386 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51690 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g006990.3.1 | Solyc07g006990 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g009220.2.1 | Solyc07g009220 | Pentatricopeptide repeat-containing protein At2g34400... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g06334 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14604 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15000 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15123 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g18446 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g19054 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g42473 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g44799 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45537 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56457 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g04699 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06632 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g27180 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 112 | 136 |
| No external refs found! |
