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  5. Smo111719

Smo111719


Description : Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo111719
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT2G17840 ERD7 Senescence/dehydration-associated protein-related 0.02 OrthoFinder output from all 47 species
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.03 OrthoFinder output from all 47 species
Adi_g024818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21104 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25299 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015304001 No alias Senescence/dehydration-associated protein At4g35985,... 0.02 OrthoFinder output from all 47 species
GSVIVT01024039001 ERD7 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_21239 ERD7 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_39730 ERD7 Senescence/dehydration-associated protein At4g35985,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g52480.1 LOC_Os01g52480 Senescence/dehydration-associated protein At4g35985,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13840.2 ERD7, LOC_Os03g13840 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g24784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_8979358g0010 No alias Senescence/dehydration-associated protein At4g35985,... 0.05 OrthoFinder output from all 47 species
Nbi_g10580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g083690.2.1 ERD7, Solyc02g083690 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc12g008460.2.1 Solyc12g008460 Senescence/dehydration-associated protein At4g35985,... 0.02 OrthoFinder output from all 47 species
Spa_g02652 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14704 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028202_P001 Zm00001e028202 Senescence/dehydration-associated protein At4g35985,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR009686 Senescence/spartin_C 206 373
No external refs found!