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  5. Smo112379

Smo112379 (PRB1, ATPRB1)


Aliases : PRB1, ATPRB1

Description : Pathogenesis-related protein 1C OS=Nicotiana tabacum


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo112379
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.02 OrthoFinder output from all 47 species
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.02 OrthoFinder output from all 47 species
AT4G33710 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 OrthoFinder output from all 47 species
Aop_g39007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27002 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20821 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.03 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
LOC_Os02g54570.1 LOC_Os02g54570 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.01 OrthoFinder output from all 47 species
Nbi_g44565 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27336 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023422 No alias CAPE precursor polypeptide & original description: CDS=1-525 0.03 OrthoFinder output from all 47 species
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Smo101024 ATPR1, PR1, PR 1 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare 0.02 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 23 146
No external refs found!