Aliases : ARF6
Description : Auxin response factor 25 OS=Oryza sativa subsp. japonica
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G35240 | ARF20 | auxin response factor 20 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G62000 | HSS, ARF1-BP, ARF2, ORE14 | auxin response factor 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g068596 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11735 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08752 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22304 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene55123.t1 | ARF6, Aspi01Gene55123 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16914 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15200 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g20778 | ARF14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22354 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g27083 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27139 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_31132 | ARF4 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39685 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432528g0010 | ARF4 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g16463 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25154 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30357 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26452 | ARF10 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26224 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g103050.3.1 | ARF1, Solyc01g103050 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56619 | ARF6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033389 | AUX/IAA_dom | 41 | 80 |
| No external refs found! |
