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  5. Smo116000

Smo116000


Description : Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN cp-actin filament-bundling factor


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo116000
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00225580 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.04 OrthoFinder output from all 47 species
AT1G64500 No alias Glutaredoxin family protein 0.11 OrthoFinder output from all 47 species
Adi_g115568 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ala_g05313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13283 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Als_g22713 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Aop_g10993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14853 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aop_g26067 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene40722.t2 Aspi01Gene40722 actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.08 OrthoFinder output from all 47 species
Cba_g38411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G069000.1 Ceric.03G069000 actin filament-bundling factor *(THRUMIN) & original... 0.11 OrthoFinder output from all 47 species
Dac_g01599 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Dac_g28733 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Dac_g39355 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g18247 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Dde_g24691 No alias actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019562001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g13480.1 LOC_Os01g13480 actin filament-bundling factor (THRUMIN) 0.07 OrthoFinder output from all 47 species
LOC_Os07g46570.1 LOC_Os07g46570 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g02811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10825 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Msp_g29256 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04826 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g06165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06898 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Pir_g07428 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Pir_g14419 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g23878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30402 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Solyc08g082590.3.1 Solyc08g082590 actin filament-bundling factor (THRUMIN) 0.1 OrthoFinder output from all 47 species
Spa_g07910 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Tin_g07425 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Tin_g21220 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species
Zm00001e027282_P001 Zm00001e027282 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 22 87
No external refs found!