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  5. Smo123905

Smo123905


Description : 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo123905

Target Alias Description ECC score Gene Family Method Actions
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.01 OrthoFinder output from all 47 species
Adi_g020210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22282 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30549 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45695.t2 OPCL1, Aspi01Gene45695 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63196.t1 OPCL1, Aspi01Gene63196 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63198.t1 OPCL1, Aspi01Gene63198 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1020.g095355 No alias not classified & original description: CDS=69-1760 0.01 OrthoFinder output from all 47 species
Cba_g18797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25397 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.01 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.05 OrthoFinder output from all 47 species
Dac_g12985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47602 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_33460 OPCL1 OPC-8:CoA synthetase 0.06 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
LOC_Os07g17970.1 LOC_Os07g17970 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g14710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g15634 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430515g0010 OPCL1 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10922g0010 OPCL1 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g20427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01073 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38290 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58318 OPCL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.01 OrthoFinder output from all 47 species
Ppi_g56806 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo177466 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo85691 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g01541 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21116 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 508 583
No external refs found!