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  5. Smo126194

Smo126194


Description : Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo126194
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g001917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g097113 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30517.t2 CRR22, Aspi01Gene30517 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35047.t1 Aspi01Gene35047 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38374.t1 Aspi01Gene38374 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.02 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30281 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31750 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_33439 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g03339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41121 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g19660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g03427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17546 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63869 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12890 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007526 No alias not classified & original description: CDS=1-1728 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025587 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 217
No external refs found!