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  5. Smo132317

Smo132317


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo132317
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
Adi_g008420 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06727 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001614 No alias not classified & original description: CDS=1-2595 0.05 OrthoFinder output from all 47 species
Azfi_s0005.g009353 No alias not classified & original description: CDS=1-2883 0.04 OrthoFinder output from all 47 species
Azfi_s0016.g014413 No alias not classified & original description: CDS=1-1530 0.06 OrthoFinder output from all 47 species
Azfi_s0022.g016204 OTP84 not classified & original description: CDS=27-2648 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031310 No alias not classified & original description: CDS=1-2304 0.04 OrthoFinder output from all 47 species
Azfi_s0063.g035406 CRR22 not classified & original description: CDS=1-1185 0.04 OrthoFinder output from all 47 species
Azfi_s0138.g051109 No alias not classified & original description: CDS=1-2523 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051566 No alias not classified & original description: CDS=1-1788 0.05 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.06 OrthoFinder output from all 47 species
Azfi_s0908.g092257 No alias not classified & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.06 OrthoFinder output from all 47 species
Dac_g18422 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
Ore_g16479 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo328 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo81196 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Smo94945 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 129 176
No external refs found!