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  5. Smo132724

Smo132724


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo132724

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
Adi_g003828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030525 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Cba_g26054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.04 OrthoFinder output from all 47 species
Gb_23967 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_38249 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26564 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44152 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_470679g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
MA_62181g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_858608g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111910 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo72244 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.05 OrthoFinder output from all 47 species
Spa_g14546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26871 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 67 115
No external refs found!