Aliases : emb2734
Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB3 import karyopherin
Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo140234 | |
| Cluster | HCCA: Cluster_93 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G19820 | emb2734 | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g11168 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02601 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02620 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g19131 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22688 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g14839 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28680 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03545 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12249.t1 | emb2734, Aspi01Gene12249 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44474.t1 | emb2734, Aspi01Gene44474 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08145 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G064500.1 | emb2734, Ceric.06G064500 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G003600.1 | emb2734, Ceric.17G003600 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.26G014000.1 | emb2734, Ceric.26G014000 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001030.13 | emb2734 | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g633750 | emb2734 | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14555 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04981 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12588 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01025460001 | emb2734 | Protein translocation.nucleus.nucleocytoplasmic... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033417001 | emb2734 | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g38760.1 | emb2734, LOC_Os07g38760 | IMB3 nucleocytoplasmic import karyopherin | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16328 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06735 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g10978 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432206g0010 | emb2734 | IMB3 nucleocytoplasmic import karyopherin | 0.07 | OrthoFinder output from all 47 species | |
| MA_10432351g0030 | emb2734 | IMB3 nucleocytoplasmic import karyopherin | 0.06 | OrthoFinder output from all 47 species | |
| MA_10437257g0020 | emb2734 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g07820.1 | emb2734 | IMB3 nucleocytoplasmic import karyopherin | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g13561 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03212 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g09038 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g30249 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12761 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02905 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21538 | emb2734 | nucleocytoplasmic import karyopherin *(IMB3) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e005369_P004 | emb2734, Zm00001e005369 | IMB3 nucleocytoplasmic import karyopherin | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035335_P001 | emb2734, Zm00001e035335 | IMB3 nucleocytoplasmic import karyopherin | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000278 | mitotic cell cycle | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0007049 | cell cycle | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
