1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo143891

Smo143891


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component


Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo143891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00209880 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.04 OrthoFinder output from all 47 species
Aob_g03843 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.13G022200.1 Ceric.13G022200 component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dac_g05557 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g31625 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g24129 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os03g61260.1 LOC_Os03g61260 component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g30980 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g00332 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Sam_g19670 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc12g098890.2.1 Solyc12g098890 component psRPL18 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Tin_g00498 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e006246_P001 Zm00001e006246 component psRPL18 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 2 112
No external refs found!