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  5. Smo144212

Smo144212 (CRT1b, AtCRT1b)


Aliases : CRT1b, AtCRT1b

Description : Protein modification.protein folding and quality control.N-glycan-dependent machinery.CNX-CRT cycle.CRT lectin chaperone


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo144212
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G09210 CRT1b, AtCRT1b calreticulin 1b 0.04 OrthoFinder output from all 47 species
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.05 OrthoFinder output from all 47 species
Adi_g007818 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054253 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057356 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079758 CRT1b, AtCRT1b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106042 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106043 CRT1b, AtCRT1b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106044 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g123209 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g26121 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16570 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10127 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g33386 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20485 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62429 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G088500.1 AtCRT3, EBS2,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G021500.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G039100.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06184 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028114001 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Gb_34343 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.06 OrthoFinder output from all 47 species
LOC_Os07g14270.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
Lfl_g02942 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12186 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10816 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ore_g18394 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32686 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39878 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100380.4.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
Spa_g07048 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13136 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17251 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18341 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Spa_g39041 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033207_P002 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 263 336
No external refs found!