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  5. Smo146310

Smo146310 (AtRABA1f, RABA1f)


Aliases : AtRABA1f, RABA1f

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo146310

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00135260 AtRABA1f,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Adi_g015797 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068988 ATRABA2A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078037 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081036 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31350 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30591 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08482 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20651 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01569 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01612 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22467 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g41226 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09606 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022800.1 AtRABA1f,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G031600.1 ATRABA5C, ARA4,... A-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dcu_g03700 ARA-1, ATRABA5E,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08021 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40522 ATRABA2A,... A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00471 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02057 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10712 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021253001 ATHSGBP, RABA1d,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
GSVIVT01023225001 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os05g20050.1 RAB-A2C,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os08g41340.1 AtRABA5d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g02647 RAB-A2C,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03672 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16053 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15033 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10780 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009470 ATRABA2A,... A-class RAB GTPase & original description: CDS=131-796 0.05 OrthoFinder output from all 47 species
Solyc01g103380.4.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc03g006270.3.1 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc09g098170.4.1 AtRABA5d,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Solyc10g045550.2.1 ATRABA2A,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Spa_g14805 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04947 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05879 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13810 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27440 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030680_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e031368_P002 RAB-A2C,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!