Aliases : AtRABA1f, RABA1f
Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo158820 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G06400 | ATRABA1A, ARA2,... | Ras-related small GTP-binding family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G16920 | ATRABA1B, RAB11, RABA1b | RAB GTPase homolog A1B | 0.04 | OrthoFinder output from all 47 species | |
| AT1G73640 | RABA6a, AtRABA6a | RAB GTPase homolog A6A | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04605 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18147 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03446 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06019 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g46356 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03700 | ARA-1, ATRABA5E,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08021 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g40522 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g44070.1 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16053 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g09974 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g103380.4.1 | ATRABA2A,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14805 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0051011 | microtubule minus-end binding | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 14 | 174 |
| No external refs found! |
