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  5. Smo164635

Smo164635 (ATX3, SDG14)


Aliases : ATX3, SDG14

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo164635

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.04 OrthoFinder output from all 47 species
Ala_g11407 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ala_g11532 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Als_g16658 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Als_g30869 ATX3, SDG14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56618 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aob_g31865 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06246 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Cba_g57811 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G107400.1 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000488.8 SDG25, ATXR7 Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Cre09.g395584 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g39988 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g07171 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08323 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
LOC_Os01g46700.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Len_g14720 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g09511 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g17819 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Mp1g17790.1 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Mp4g21720.1 ATX4, SDG16 class III/Trithorax histone methyltransferase component... 0.05 OrthoFinder output from all 47 species
Ore_g05016 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g09508 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14051 No alias class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14555 No alias class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g083410.3.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Tin_g13148 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Tin_g13372 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 621 726
No external refs found!