1. Home
  2. Species
  3. Selaginella moellendorffii
  4. Sequence
  5. Smo169717

Smo169717


Description : Protein biosynthesis.translation elongation.eEF1A aminoacyl-tRNA binding factor


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo169717
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00216110 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.03 OrthoFinder output from all 47 species
AT1G07920 No alias GTP binding Elongation factor Tu family protein 0.03 OrthoFinder output from all 47 species
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.06 OrthoFinder output from all 47 species
Aev_g07757 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ala_g10935 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Als_g39127 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Aop_g09508 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0291.g063341 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Cba_g03670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G081400.1 Ceric.09G081400 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G073700.1 Ceric.31G073700 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g09531 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Gb_17471 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08010.1 LOC_Os03g08010 aminoacyl-tRNA binding factor (eEF1A) 0.05 OrthoFinder output from all 47 species
LOC_Os03g08020.1 LOC_Os03g08020 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08050.1 LOC_Os03g08050 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Len_g51156 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g17369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 OrthoFinder output from all 47 species
Mp6g00950.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Mp6g17700.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Mp6g18140.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Msp_g06541 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Msp_g21467 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Msp_g29578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06194 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ore_g12703 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ore_g45064 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Pp3c2_6690V3.1 Pp3c2_6690 GTP binding Elongation factor Tu family protein 0.01 OrthoFinder output from all 47 species
Ppi_g05066 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013360 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16997 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16999 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g28089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29350 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Solyc06g005060.3.1 Solyc06g005060 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Solyc11g150146.1.1 Solyc11g150146 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Spa_g24424 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Spa_g24425 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50273 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e026762_P001 Zm00001e026762 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Zm00001e026763_P003 Zm00001e026763 aminoacyl-tRNA binding factor (eEF1A) 0.06 OrthoFinder output from all 47 species
Zm00001e030598_P002 Zm00001e030598 aminoacyl-tRNA binding factor (eEF1A) 0.02 OrthoFinder output from all 47 species
Zm00001e031390_P004 Zm00001e031390 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Zm00001e031391_P002 Zm00001e031391 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Zm00001e031407_P001 Zm00001e031407 aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
No external refs found!