Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS29 component
Gene families : OG0008810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008810_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo171412 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ceric.06G036200.1 | Ceric.06G036200 | component *(uS14) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cre08.g358556 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g56241.1 | LOC_Os03g56241 | component RPS29 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g32380.1 | LOC_Os12g32380 | component RPS29 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436379g0010 | No alias | component RPS29 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c14_10190V3.1 | Pp3c14_10190 | Ribosomal protein S14p/S29e family protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c2_6730V3.1 | Pp3c2_6730 | Ribosomal protein S14p/S29e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015037 | No alias | component *(uS14) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g073430.4.1 | Solyc06g073430 | component RPS29 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g020877.1.1 | Solyc11g020877 | component RPS29 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001209 | Ribosomal_S14 | 7 | 56 |
| No external refs found! |
