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  5. Smo177393

Smo177393 (AT4CL2, 4CL2)


Aliases : AT4CL2, 4CL2

Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.4-coumarate:CoA ligase (4CL)


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo177393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00213640 4CL1, AT4CL1,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 OrthoFinder output from all 47 species
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.04 OrthoFinder output from all 47 species
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.03 OrthoFinder output from all 47 species
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.03 OrthoFinder output from all 47 species
AT3G21230 4CL5 4-coumarate:CoA ligase 5 0.03 OrthoFinder output from all 47 species
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.03 OrthoFinder output from all 47 species
Adi_g103472 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Adi_g115581 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g31792 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g09467 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Als_g32388 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06612 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g12693 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g17905 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11403.t1 AT4CL2, 4CL2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16478.t1 ACOS5, Aspi01Gene16478 acyl-CoA synthetase *(ACS5) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37829.t1 AT4CL2, 4CL2,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53552.t1 4CL1, AT4CL1,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013344 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Cba_g05200 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g34238 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g41839 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G038600.1 4CL3, Ceric.12G038600 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.12G077900.1 4CL3, Ceric.12G077900 not classified & original description: pacid=50601305... 0.03 OrthoFinder output from all 47 species
Ceric.15G048400.1 4CL3, Ceric.15G048400 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G083800.1 AT4CL2, 4CL2,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.33G041000.1 ACOS5, Ceric.33G041000 acyl-CoA synthetase *(ACS5) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g07017 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.08 OrthoFinder output from all 47 species
Dcu_g09728 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g38297 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g24331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g31145 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31505 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01010497001 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
GSVIVT01024400001 4CL3 4-coumarate--CoA ligase 2 OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Gb_40571 AT4CL2, 4CL2 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
Gb_40573 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Gb_41091 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g08100.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 OrthoFinder output from all 47 species
LOC_Os02g46970.1 4CL3, LOC_Os02g46970 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
LOC_Os04g24530.1 ACOS5, LOC_Os04g24530 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44620.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
LOC_Os08g34790.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Len_g06460 4CL1, AT4CL1, 4CL.1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20151 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06579 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g15665 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
Msp_g00641 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g34152 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g42310 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08302 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023264 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Smo173133 4CL3 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Solyc02g088710.3.1 ACOS5, Solyc02g088710 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Solyc03g117870.3.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Solyc06g068650.4.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
Spa_g07084 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Spa_g09896 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Spa_g22789 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Spa_g47039 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07442 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Zm00001e004061_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Zm00001e013798_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 OrthoFinder output from all 47 species
Zm00001e023286_P002 4CL3, Zm00001e023286 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 456 531
No external refs found!