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  5. Smo177466

Smo177466 (OPCL1)


Aliases : OPCL1

Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo177466
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00100040 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00050p00171700 OPCL1,... 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.04 OrthoFinder output from all 47 species
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
AT5G63380 No alias AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Adi_g012372 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03052.t1 OPCL1, Aspi01Gene03052 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30890 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G005700.1 Ceric.25G005700 not classified & original description: pacid=50594444... 0.02 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.02 OrthoFinder output from all 47 species
Dac_g10656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010358001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04708 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_19735 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g67530.1 LOC_Os01g67530 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
LOC_Os03g05780.1 LOC_Os03g05780 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17970.1 LOC_Os07g17970 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g38504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426784g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_199593g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8552247g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g43750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37295 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc11g007970.2.1 OPCL1, Solyc11g007970 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 449 524
No external refs found!