Smo181239

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.DOG transcription factor

Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo181239

Target	Alias	Description	ECC score	Gene Family Method
AT4G18660	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.02	OrthoFinder output from all 47 species
AT4G18680	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.02	OrthoFinder output from all 47 species
AT4G18690	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	OrthoFinder output from all 47 species
Mp1g28510.1	No alias	transcription factor (DOG)	0.02	OrthoFinder output from all 47 species
Nbi_g05273	No alias	DOG-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14225	No alias	DOG-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g25372	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0019915	lipid storage	IEP	HCCA
BP	GO:0051235	maintenance of location	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025422	TGA_domain	26	101

External Links

No external refs found!