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  5. Smo228166

Smo228166


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL29 component


Gene families : OG0004690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo228166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00034600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s03807p00002720 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT3G06680 No alias Ribosomal L29e protein family 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007916 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043647 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cba_g68190 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.22G077900.1 Ceric.22G077900 component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.39G032900.1 Ceric.39G032900 component *(eL29) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 OrthoFinder output from all 47 species
Dac_g14001 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g48563 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g11244 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01035023001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_37735 No alias component RPL29 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os01g19840.1 LOC_Os01g19840 component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os05g28750.1 LOC_Os05g28750 component RPL29 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Len_g34826 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g18113 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
MA_10433318g0010 No alias component RPL29 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Pp3c14_7570V3.1 Pp3c14_7570 Ribosomal L29e protein family 0.07 OrthoFinder output from all 47 species
Pp3c1_34380V3.1 Pp3c1_34380 Ribosomal L29e protein family 0.03 OrthoFinder output from all 47 species
Ppi_g34065 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g17848 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!