Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.gamma subunit
Gene families : OG0005806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005806_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Smo228208 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00046010 | evm_27.TU.AmTr_v1... | Protein translocation.endoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G48570 | No alias | secE/sec61-gamma protein transport protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G50460 | No alias | secE/sec61-gamma protein transport protein | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.31G013000.1 | Ceric.31G013000 | subunit gamma of co-translational insertion system Sec61... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000980.10 | No alias | Protein translocation.endoplasmic... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32478 | No alias | subunit gamma of co-translational insertion system Sec61... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033084001 | No alias | Protein translocation.endoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g08180.1 | LOC_Os02g08180 | subunit gamma of co-translational insertion system Sec61... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os06g44374.1 | LOC_Os06g44374 | subunit gamma of co-translational insertion system Sec61... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10431451g0010 | No alias | subunit gamma of co-translational insertion system Sec61... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g00820.1 | No alias | subunit gamma of co-translational insertion system Sec61... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c19_3570V3.1 | Pp3c19_3570 | secE/sec61-gamma protein transport protein | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23459 | No alias | subunit gamma of co-translational insertion system Sec61... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| BP | GO:0006405 | RNA export from nucleus | IEP | HCCA |
| BP | GO:0006406 | mRNA export from nucleus | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0050657 | nucleic acid transport | IEP | HCCA |
| BP | GO:0050658 | RNA transport | IEP | HCCA |
| BP | GO:0051028 | mRNA transport | IEP | HCCA |
| BP | GO:0051168 | nuclear export | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051236 | establishment of RNA localization | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001901 | Translocase_SecE/Sec61-g | 12 | 65 |
| No external refs found! |
