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  5. Smo229984

Smo229984


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo229984

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.04 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.04 OrthoFinder output from all 47 species
Adi_g113233 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12027 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28385 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32172.t1 PGP2, Aspi01Gene32172 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42787.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G031400.1 PGP13, Ceric.10G031400 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000293.10 PGP11 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12428 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17218 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31851 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006613001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01036801001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g02924 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_1824g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8590327g0010 No alias ABC transporter B family member 17 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g21430.1 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Mpzg01120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13353 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32270 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27262 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28855 PGP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42482 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47037 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05161 PGP20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Ppi_g03284 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07008 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.02 OrthoFinder output from all 47 species
Smo123915 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo231714 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo233433 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo419448 ABCB19,... ABC transporter B family member 19 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc02g087410.4.1 Solyc02g087410 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Solyc03g093650.3.1 Solyc03g093650 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Spa_g17188 PGP10 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g19381 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11197 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12815 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41085 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 342 491
No external refs found!