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  5. Smo271198

Smo271198 (UBQ4)


Aliases : UBQ4

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ ubiquitin-fold protein


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo271198

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00161810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.02 OrthoFinder output from all 47 species
Adi_g119828 UBQ11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08097 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33040 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Als_g41833 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59298 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21615 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29155 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g32072 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04828.t1 UBQ11, Aspi01Gene04828 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16401.t1 UBQ10, Aspi01Gene16401 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20737.t1 UBQ11, Aspi01Gene20737 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20739.t1 UBQ11, Aspi01Gene20739 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57837.t1 UBQ10, Aspi01Gene57837 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g79067 UBQ11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G010600.1 UBQ14, Ceric.03G010600 UBQ ubiquitin-fold protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z299200.1 UBQ3, Ceric.1Z299200 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G048500.1 UBQ11, Ceric.24G048500 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G038000.1 UBQ3, Ceric.29G038000 UBQ ubiquitin-fold protein & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g23104 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51446 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05526 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07605 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g13932 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g39498 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28123 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29490 RUB1, ATRUB1, NEDD8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001971001 UBQ11 Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
Gb_07386 UBQ4 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53620.1 UBQ4, LOC_Os04g53620 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
LOC_Os08g08700.1 LOC_Os08g08700 Polyubiquitin 9 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g36572 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16898 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28234 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_41251g0030 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
MA_46617g0010 UBQ11 Polyubiquitin (Fragment) OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Mp3g22950.1 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp4g02740.1 UBQ10 ubiquitin-fold protein (UBQ) 0.02 OrthoFinder output from all 47 species
Mp6g03960.1 UBQ4 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Mp6g16040.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species
Msp_g09233 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17628 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23240 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g03264 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26810 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g27503 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g35753 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g41891 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07363 No alias UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g008590.4.1 Solyc08g008590 component RPL40 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g17745 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009126_P001 UBQ11, Zm00001e009126 Polyubiquitin (Fragment) OS=Acetabularia peniculus... 0.02 OrthoFinder output from all 47 species
Zm00001e010317_P001 Zm00001e010317 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035030_P001 Zm00001e035030 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 231 302
No external refs found!