Smo27494

Description : Chromatin organisation.histones.H1 linker histone

Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo27494
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Adi_g003228	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g087695	No alias	linker histone *(H1) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g116607	No alias	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06326	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g69452	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene03001.t1	HIS1-3, Aspi01Gene03001	regulatory component *(Tom5) of outer mitochondrion...	0.02	OrthoFinder output from all 47 species
Azfi_s0099.g044182	No alias	linker histone *(H1) & original description: CDS=160-858	0.04	OrthoFinder output from all 47 species
Dcu_g02558	HIS1-3	linker histone *(H1) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g14931	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63119	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g20559	No alias	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	1	61

External Links

No external refs found!