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  5. Smo32263

Smo32263 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo32263

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g08191 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo117311 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo92825 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 103 151
No external refs found!