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  5. Smo39143

Smo39143 (ALC)


Aliases : ALC

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo39143

Target Alias Description ECC score Gene Family Method Actions
Aev_g06746 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28550.t1 CIB1, Aspi01Gene28550 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Azfi_s0104.g044857 SPT bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g01170 HEC3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21654 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020814001 SRL2, PIF4, AtPIF4 External stimuli response.light.red/far red light.PIF... 0.02 OrthoFinder output from all 47 species
GSVIVT01021787001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_07156 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Len_g37679 RHD6 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06488 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.02 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11299 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034658_P003 Zm00001e034658 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 12 58
No external refs found!