Smo405209 (GATA20)

Aliases : GATA20

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo405209
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AT3G24050	GATA1	GATA transcription factor 1	0.03	OrthoFinder output from all 47 species
Als_g52135	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10302.t2	GATA23, Aspi01Gene10302	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12734.t1	GATA5, Aspi01Gene12734	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64140.t1	GATA4, Aspi01Gene64140	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os05g49280.1	GATA20, LOC_Os05g49280	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Len_g12686	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g37564	GATA5	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g062760.4.1	HAN, MNP,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc05g053500.4.1	GATA1, Solyc05g053500	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0019107	myristoyltransferase activity	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	260	294

External Links

No external refs found!