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  5. Smo410071

Smo410071


Description : Class V chitinase OS=Arabidopsis thaliana


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo410071
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00150p00033570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 OrthoFinder output from all 47 species
AT4G19750 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 OrthoFinder output from all 47 species
AT4G19800 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.05 OrthoFinder output from all 47 species
AT4G19810 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.05 OrthoFinder output from all 47 species
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20488 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48655 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25904.t1 Aspi01Gene25904 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43352.t1 Aspi01Gene43352 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47068.t1 Aspi01Gene47068 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47069.t1 Aspi01Gene47069 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47070.t1 Aspi01Gene47070 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53989.t1 Aspi01Gene53989 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53991.t1 Aspi01Gene53991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53993.t1 Aspi01Gene53993 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64398.t1 Aspi01Gene64398 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64399.t1 Aspi01Gene64399 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17721 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47062 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12194 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001059001 No alias Class V chitinase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00909 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04928 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g28798 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_4925966g0010 No alias no description available(sp|a0a072vep0|cht5a_medtr :... 0.02 OrthoFinder output from all 47 species
MA_83505g0010 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g50672 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00782 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08820 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005100.4.1 Solyc07g005100 Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 43 351
No external refs found!