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  5. Smo415309

Smo415309


No description available


Gene families : OG0000281 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000281_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo415309
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00242840 evm_27.TU.AmTr_v1... Protein LURP-one-related 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G33840 No alias Protein of unknown function (DUF567) 0.04 OrthoFinder output from all 47 species
AT3G15810 No alias Protein of unknown function (DUF567) 0.03 OrthoFinder output from all 47 species
AT5G01750 No alias Protein of unknown function (DUF567) 0.04 OrthoFinder output from all 47 species
AT5G20640 No alias Protein of unknown function (DUF567) 0.02 OrthoFinder output from all 47 species
AT5G41590 No alias Protein of unknown function (DUF567) 0.02 OrthoFinder output from all 47 species
Aev_g10360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05102.t1 Aspi01Gene05102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06258.t1 Aspi01Gene06258 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57111.t1 Aspi01Gene57111 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015775 No alias not classified & original description: CDS=61-630 0.04 OrthoFinder output from all 47 species
Azfi_s0557.g076881 No alias not classified & original description: CDS=233-802 0.03 OrthoFinder output from all 47 species
Azfi_s4109.g118011 No alias not classified & original description: CDS=230-856 0.03 OrthoFinder output from all 47 species
Ceric.10G078700.1 Ceric.10G078700 not classified & original description: pacid=50612340... 0.03 OrthoFinder output from all 47 species
Ceric.19G054100.1 Ceric.19G054100 not classified & original description: pacid=50576603... 0.03 OrthoFinder output from all 47 species
Dac_g06252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017334001 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030237001 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_02523 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_02701 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_02702 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_03357 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_19661 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_20017 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_37430 No alias Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g60170.1 LOC_Os01g60170 Protein LURP-one-related 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08200.1 LOC_Os03g08200 Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g60210.1 LOC_Os03g60210 Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g44271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_193719g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_205724g0010 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_24574g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_445275g0010 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_44963g0010 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_4774837g0010 No alias Protein LURP-one-related 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_571782g0010 No alias Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_923117g0010 No alias Protein LURP-one-related 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g01730.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g03380.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp2g03400.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g04510.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g10780.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g17240.1 No alias Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g36054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011826 No alias not classified & original description: CDS=80-649 0.02 OrthoFinder output from all 47 species
Smo410470 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo410474 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo410475 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc08g081680.2.1 Solyc08g081680 Protein LURP-one-related 17 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc09g014820.3.1 Solyc09g014820 Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc09g014910.4.1 Solyc09g014910 Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g009130.3.1 Solyc12g009130 Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020695_P001 Zm00001e020695 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e027308_P001 Zm00001e027308 Protein LURP-one-related 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038874_P001 Zm00001e038874 Protein LURP-one-related 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e042222_P002 Zm00001e042222 Protein LURP-one-related 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007612 LOR 27 107
No external refs found!