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  5. Smo417586

Smo417586


No description available


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo417586
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00231510 evm_27.TU.AmTr_v1... Protein HVA22 OS=Hordeum vulgare 0.02 OrthoFinder output from all 47 species
AT5G62490 ATHVA22B, HVA22B HVA22 homologue B 0.03 OrthoFinder output from all 47 species
Als_g53989 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.02 OrthoFinder output from all 47 species
Dac_g12350 ATHVA22A, HVA22A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24347 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g27730.1 LOC_Os09g27730 Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 114.0) 0.04 OrthoFinder output from all 47 species
MA_113124g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g09973 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g072680.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 148.0) 0.06 OrthoFinder output from all 47 species
Solyc10g007820.3.1 HVA22F, Solyc10g007820 HVA22-like protein f OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 29 102
No external refs found!