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  5. Smo421625

Smo421625 (AGP8, FLA8)


Aliases : AGP8, FLA8

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo421625
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00223190 FLA14,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.01 OrthoFinder output from all 47 species
Als_g45774 AGP8, FLA8 Fasciclin-type arabinogalactan protein & original... 0.01 OrthoFinder output from all 47 species
Aob_g19882 SOS5 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Cba_g12719 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08054 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03525 FLA10 Fasciclin-type arabinogalactan protein & original... 0.01 OrthoFinder output from all 47 species
Ehy_g09971 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16145 FLA10 Fasciclin-type arabinogalactan protein & original... 0.01 OrthoFinder output from all 47 species
Mp5g05390.1 SOS5 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Mp5g10880.1 SOS5 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021825 FLA14 Fasciclin-type arabinogalactan protein & original... 0.01 OrthoFinder output from all 47 species
Spa_g50837 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 216 350
No external refs found!