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  5. Smo425085

Smo425085


No description available


Gene families : OG0002638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo425085
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00100950 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00022p00224500 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00069p00110230 evm_27.TU.AmTr_v1... Protein MEN-8 OS=Silene latifolia 0.04 OrthoFinder output from all 47 species
AT3G07450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT5G07230 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G52160 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT5G55410 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G62080 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Aop_g14820 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g24129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G098200.1 Ceric.01G098200 not classified & original description: pacid=50591616... 0.03 OrthoFinder output from all 47 species
Ceric.07G064700.1 Ceric.07G064700 not classified & original description: pacid=50625967... 0.04 OrthoFinder output from all 47 species
Dcu_g18333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_27177 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g43290.1 LOC_Os08g43290 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g41120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14335 No alias type-III lipid transfer protein *(LTP-III) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009590.3.1 Solyc01g009590 Protein 108 OS=Solanum lycopersicum (sp|q43495|108_sollc : 89.4) 0.03 OrthoFinder output from all 47 species
Solyc01g086830.4.1 Solyc01g086830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g026115.1.1 Solyc03g026115 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g035820.1.1 Solyc06g035820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g40221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 14 102
No external refs found!