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  5. Smo428906

Smo428906 (APRR2, PRR2)


Aliases : APRR2, PRR2

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0001485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo428906
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00133630 ATGLK1, GPRI1,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00149p00035260 APRR2, PRR2,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.03 OrthoFinder output from all 47 species
Adi_g065765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07360 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g12665 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g08837 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21877.t1 GPRI2, ATGLK2,... GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009757 GPRI2, ATGLK2, GLK2 not classified & original description: CDS=44-1300 0.03 OrthoFinder output from all 47 species
Azfi_s0487.g073465 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dac_g16068 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g18704 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020604001 ATGLK1, GPRI1, GLK1 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
LOC_Os01g13740.1 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
LOC_Os06g24070.1 ATGLK1, GPRI1,... G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
Len_g36726 GPRI2, ATGLK2, GLK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32592 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g36232 ATGLK1, GPRI1, GLK1 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g04237 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g18892 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g17843 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g32425 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008347 GPRI2, ATGLK2, GLK2 GARP subgroup GLK transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g04268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10621 No alias GARP subgroup GLK transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc07g053630.4.1 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g14653 APRR2, PRR2 GARP subgroup GLK transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e036073_P002 GPRI2, ATGLK2,... G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 28 124
No external refs found!