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  5. Smo431043

Smo431043


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo431043

Target Alias Description ECC score Gene Family Method Actions
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02094.t1 Aspi01Gene02094 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60948.t1 OTP84, Aspi01Gene60948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001067 EMB2758 not classified & original description: CDS=1-1968 0.05 OrthoFinder output from all 47 species
Azfi_s0002.g001193 No alias not classified & original description: CDS=1-1761 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.05 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Dcu_g08636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07070 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.02 OrthoFinder output from all 47 species
Smo108616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo111910 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo135822 CRR2 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo20633 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo81376 CRR2 Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Smo88697 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo96227 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Tin_g05116 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07561 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 535 607
No external refs found!