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  5. Smo444022

Smo444022


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL35 component


Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo444022

Target Alias Description ECC score Gene Family Method Actions
AT2G24090 No alias Ribosomal protein L35 0.06 OrthoFinder output from all 47 species
Adi_g032989 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g18654 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g18112 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g00423 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.15G044500.1 Ceric.15G044500 component *(bL35c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre04.g217932 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g26648 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g43056 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Dde_g06179 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g03085 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Gb_16123 No alias component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os06g43900.1 LOC_Os06g43900 component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g09835 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Len_g34881 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_181338g0010 No alias component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp5g05850.1 No alias component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Ore_g08410 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pir_g14080 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pnu_g04836 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c21_8680V3.1 Pp3c21_8680 Ribosomal protein L35 0.02 OrthoFinder output from all 47 species
Pp3c22_13420V3.1 Pp3c22_13420 Ribosomal protein L35 0.02 OrthoFinder output from all 47 species
Ppi_g18684 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Solyc07g006000.3.1 Solyc07g006000 component psRPL35 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g24771 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g30198 No alias component *(bL35c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e037448_P001 Zm00001e037448 component psRPL35 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR021137 Ribosomal_L35 60 115
No external refs found!