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  5. Smo447003

Smo447003


Description : Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum


Gene families : OG0005387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo447003
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Aev_g07744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11878 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10412 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010486 No alias not classified & original description: CDS=60-1301 0.03 OrthoFinder output from all 47 species
Cba_g10884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G037200.1 Ceric.31G037200 not classified & original description: pacid=50575016... 0.04 OrthoFinder output from all 47 species
Cre02.g095650 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g07515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04667 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01121 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00547 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14026 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26899 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61824 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10965 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41030 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02582 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 140 380
No external refs found!